I just did this for my 2016 MKX. Here are the instructions I followed:
1. Open the floor console arm rest.
2. Pull up to release the clips (2 in center of cup holders / 2 at back near hinge of arm rest) and remove the floor console trim panel.
a. Disconnect the electrical connector for the lighted cupholders
3. Pull out to release the clips and remove the RH (woodgrain) floor console upper trim panel.
4. Repeat for the LH console upper trim panel.
5. Open the media bin.
6. Remove the media hub.
a. Disconnect the electrical connector.
7. Release the floor console upper side trim panels from each side. They do not have to be removed.
8. Close the media bin and remove the bolts, release the clips and pull up and back to remove the media bin assembly (6 bolts).
a. Disconnect the electrical connectors.
9. Release the clips and remove the instrument panel speaker grille (6 clips)
a. Disconnect the electrical connectors.
10. For the (FCIM climate/radio) center console panel (Sync system is attached to the panel)
a. Remove the bolts (2 Top / 2 Bottom).
b. Remove the screws (2 per side)
c. Disconnect the electrical connectors and remove the FCIM.